[Sax-project-users] A Install problem

Giovanni Bussi giovanni.bussi at gmail.com
Tue Jul 14 12:18:21 CEST 2009 

On Tue, Jul 14, 2009 at 12:15 PM, onionys<onionys at gmail.com> wrote:
> Dear Giovanni:
>
> As the suggestion, after ./configure
>
> I edited the make.sys file:
>
> -----
> changing "-r8" into "-fdefault-real-8"
>
> add to the DFLAGS in the make.sys "-D__INTEL"
> -----
>
> make allmake
> cd sax/src
> make all
>
> Then the compilation has been completed.

Perfect! But be careful, if possible try to setup a short calculation
and compare the results with different numbers of processors.

>
> (but it usually showsed the messages I don't understand:
> make[2]: Nothing to be done for `loclib_only'.)

I think this is not a problem.


>
> And very thanks your help.

You're welcome.


Giovanni

>
> Regards
> =============
> My computer and compiler setup:
> CPU:  Intel(R) Core(TM)2 Quad  CPU   Q8200  @ 2.33GHz
> OS:  Linux Debian 2.6.26-1-amd64 SMP x86_64 GNU/Linux
> MPI:  MPICH2
> fortran complier: gfortran-4.3
> gcc complier: gcc-4.3
> The BLAS ALTAS LAPACK are installed
> =============
>
> Song Yang
> Ph.D student
> Department of Photonics and
> Institute of Electro-Optical Engineering
> National Chiao Tung University
> 1001 Tahsueh Rd., Hsinchu 30050, Taiwan
> Tel.: +886-3-5712121 ext.56310
> Fax: +886-3-5716631
> e-mail: onionys at gmail.com
>
> 2009/7/14 Giovanni Bussi <giovanni.bussi at gmail.com>
>>
>> It seems that the ptk library is not properly compiled.
>>
>> As a quick fix try to add to the DFLAGS in the make.sys "-D__INTEL"
>>
>> I know that you are using gfortran and not intel, but presently there
>> is no preset for gfortran in the ptk/include/ptk_config.h file, and I
>> guess that gfortran *could* be compatible with the intel preset.
>>
>> Try and let me know!
>>
>> Giovanni
>>
>> PS please use "reply-to-all" so that the email is also sent to the
>> sax-project-users list, and other people can see it
>>
>> On Tue, Jul 14, 2009 at 11:31 AM, onionys<onionys at gmail.com> wrote:
>> > Dear Giovanni:
>> >
>> > After I edited the make.sys file, chang "-r8" into "-fdefault-real-8"
>> >
>> > To complie the ffti package has been ok.
>> >
>> > But to complie the ptk package still encounter the same problem, and
>> > shows
>> > the message as follow:
>> >
>> > ( It seems that the complier can't find the subroutine "
>> > ptk_bcast(buffer,root,comm,ierr) ",
>> >
>> > which is mentioned in the README file in the directory /ptk )
>> >
>> > ==========================================================
>> > mpif90 -O3 -fdefault-real-8 -x f95-cpp-input -D__LINUX64 -D__FFTW
>> > -D__MPI
>> > -D__PARA -I. -I../../sax/include -I../../lasi/src/
>> > -I../../lasi/include
>> > -I../../ffti/src/   -I../../ffti/include -I../../lapack/src/
>> > -I../../lapack/include -I../../ptk/src/   -I../../ptk/include
>> > -I../../numrec/src/   -I../../numrec/include -I../../iotk/src/
>> > -I../../iotk/include -I../../fftw/src/   -I../../fftw/include
>> > -I../../blas/src/   -I../../blas/include      -c bse_options_module.f90
>> > bse_options_module.f90:158.44:
>> >
>> >   call ptk_bcast(options%nbandmin,root,comm)
>> >                                            1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:159.44:
>> >
>> >   call ptk_bcast(options%nbandmax,root,comm)
>> >                                            1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:160.57:
>> >
>> >   call ptk_bcast(options%cutoff_polarizability,root,comm)
>> >                                                         1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:161.47:
>> >
>> >   call ptk_bcast(options%cutoff_fock,root,comm)
>> >                                               1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:165.48:
>> >
>> >   call ptk_bcast(options%energy_shift,root,comm)
>> >                                                1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:166.44:
>> >
>> >   call ptk_bcast(options%bse_emin,root,comm)
>> >                                            1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:167.44:
>> >
>> >   call ptk_bcast(options%bse_emax,root,comm)
>> >                                            1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:168.44:
>> >
>> >   call ptk_bcast(options%bse_spin,root,comm)
>> >                                            1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:169.54:
>> >
>> >   call ptk_bcast(options%convert_from_pwscf,root,comm)
>> >                                                      1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > bse_options_module.f90:172.43:
>> >
>> >     call ptk_bcast(options%nelec,root,comm)
>> >                                           1
>> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> > (1)
>> > make[1]: *** [bse_options_module.o] Error 1
>> > make[1]: Leaving directory `/cluster/node00/sax-1.0.0/sax/src'
>> > make: *** [all] Error 2
>> > ==========================================================
>> >
>> >
>> > Regards
>> >
>> > ======
>> > Song Yang
>> > Ph.D student
>> > Department of Photonics and
>> > Institute of Electro-Optical Engineering
>> > National Chiao Tung University
>> > 1001 Tahsueh Rd., Hsinchu 30050, Taiwan
>> > Tel.: +886-3-5712121 ext.56310
>> > Fax: +886-3-5716631
>> > e-mail: onionys at gmail.com
>> >
>> >
>> >
>> > 2009/7/14 Giovanni Bussi <giovanni.bussi at gmail.com>
>> >>
>> >> Dear onionys,
>> >>
>> >> it seems that the compiler is complaining:
>> >> gfortran: unrecognized option '-r8'
>> >>
>> >> First fix this, then retry. You should edit the make.sys file,
>> >> changing "-r8" into "-fdefault-real-8"
>> >>
>> >> Giovanni
>> >>
>> >> On Tue, Jul 14, 2009 at 4:35 AM, onionys<onionys at gmail.com> wrote:
>> >> > Dear developers:
>> >> >
>> >> >     I have download the sax-1.0.0.tar.gz, Bug_fixed_1.0.0.1.tar.gz,
>> >> > and
>> >> > workaround_1.0.0.2.tar.gz to my computer.
>> >> >
>> >> > And I meet some problem while I am installing it into my system:
>> >> >
>> >> > ================================
>> >> > while I install SAX
>> >> > ----
>> >> > ./configure
>> >> >
>> >> > make allmake
>> >> >
>> >> > cd sax/src
>> >> >
>> >> > make all
>> >> > ----
>> >> > Then I encountered some problem.
>> >> >
>> >> > it showed the message:
>> >> > ---------------------------------------------------
>> >> > mpif90 -O3 -r8  -x f95-cpp-input -D__LINUX64 -D__FFTW -D__MPI
>> >> > -D__PARA
>> >> > -I.
>> >> > -I../../ffti/include -I../../fftw/src/   -I../../fftw/include
>> >> > -I../../blas/src/   -I../../blas/include      -c ffti_external.f90
>> >> > gfortran: unrecognized option '-r8'
>> >> > ffti_external.f90:615.24:
>> >> >
>> >> >   call ffti_singleton3d(f,nr1,nr2,nr3,idir)
>> >> >                        1
>> >> > Error: Type mismatch in argument 'f' at (1); passed COMPLEX(8) to
>> >> > COMPLEX(4)
>> >> > make[1]: *** [ffti_external.o] Error 1
>> >> > make[1]: Leaving directory `/cluster/node00/sax-1.0.0/ffti/src'
>> >> > make: *** [all] Error 2
>> >> > ---------------------------------------------------
>> >> >
>> >> > After modified the file "ffti_singleton.f90" at line 15
>> >> >
>> >> > complex, intent(inout) :: f(:)
>> >> >
>> >> > to
>> >> >
>> >> > complex(kind=8), intent(inout) :: f(:)
>> >> >
>> >> > it seemed to pass the complie.
>> >> >
>> >> > But tehn It showed the next message as:
>> >> > ---------------------------------------------------
>> >> > mpif90 -O3 -r8  -x f95-cpp-input -D__LINUX64 -D__FFTW -D__MPI
>> >> > -D__PARA
>> >> > -I.
>> >> > -I../../ptk/include   -c test.f90
>> >> > gfortran: unrecognized option '-r8'
>> >> > test.f90:14.44:
>> >> >
>> >> > call ptk_bcast(i,root=0,comm=ptk_comm_world)
>> >> >                                            1
>> >> > Error: There is no specific subroutine for the generic 'ptk_bcast' at
>> >> > (1)
>> >> > make[1]: *** [test.o] Error 1
>> >> > make[1]: Leaving directory `/cluster/node00/sax-1.0.0/ptk/src'
>> >> > make: *** [all] Error 2
>> >> > ---------------------------------------------------
>> >> >
>> >> > I am sorry that I don't know how to fix this problem...
>> >> >
>> >> > And this is the information of my computer system:
>> >> > (The culster fabricated by two same computers.)
>> >> >
>> >> > CPU:  Intel(R) Core(TM)2 Quad  CPU   Q8200  @ 2.33GHz
>> >> > OS:  Linux Debian 2.6.26-1-amd64 SMP x86_64 GNU/Linux
>> >> > MPI:  MPICH2
>> >> > fortran complier: gfortran-4.3
>> >> > gcc complier: gcc-4.3
>> >> > The BLAS ALTAS LAPACK are installed
>> >> >
>> >> > Regards.
>> >> >
>> >> > ======
>> >> > Song Yang
>> >> > Ph.D student
>> >> > Department of Photonics and
>> >> > Institute of Electro-Optical Engineering
>> >> > National Chiao Tung University
>> >> > 1001 Tahsueh Rd., Hsinchu 30050, Taiwan
>> >> > Tel.: +886-3-5712121 ext.56310
>> >> > Fax: +886-3-5716631
>> >> > e-mail: onionys at gmail.com
>> >> >
>> >> > _______________________________________________
>> >> > Sax-project-users mailing list
>> >> > Sax-project-users at qe-forge.org
>> >> > http://qe-forge.org/mailman/listinfo/sax-project-users
>> >> >
>> >> >
>> >
>> >
>
>

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